Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935240.1_cds_XP_016481116.1_72482
CDS Infomation

[gene=LOC107802180] [db_xref=GeneID:107802180] [protein=uncharacterized protein LOC107802180] [protein_id=XP_016481116.1] [location=join(6069..7112,7202..8188,8282..8323)] [gbkey=CDS]
Sequence

ATGGAGAAAAAGCAGCTGGATTTCAATGCACCACTTTTATCAGTGAGGAAAATTTCATCA
TCTTTATCCCCTCATGAGAGAGCAAATAAAAAGATTATAGAAAGGGCGCCACCGAATCGA
CAACAATCACTTCCTGTCAAAAAATCAGATTGGGAATTGAGTGAAGTGACTAAACCAGTA
GCTGTTCCATTTATGTGGGAACAAATCCCTGGTAGACGAAAAGGTAACAATGATGCCCGA
GCTAACCTTCGAGTGGAGTGCTCAAGTAGTCCTAGGCTGCCCCCCGGAAGATTGCCAGAG
ACTATTCGGTTCTATTCGGGTGAAAGGCCTCGTGCTCAAAACATTTACAAGTCTCCAGCT
GAAGGACTTCCTTGGATTGATCATGCAGCTTTACTGGATAGCCTAGTGGAAAGTATATAT
ACAAGAGGAGACAGAGAAAGTGAGGATGATGCTTATTCTGATGCTCCTGAAACCTTGTCA
CCTACCGAATCCTTATCCTTGGACTGCAGTGTCAGTGGTCTGAGCGGACATCAAAGTTCG
GATTCAAAACCATCTGGAACCTTTTCCATTGACTCCCAAACTAGAGACTTTATGATGAGC
CGATTCTTACCTGCAGCAAAAGCTGTTGTTTTGGAGACGCCTCAGTATGTTCAAAAAAAG
CAAGTTCCAGTCAGTACTGAACAACCGAAGCCAGTACCCGTGGAACGAAAGCCAACAGTT
AAGCGGATGGAGTCTAAACCTGTCTCATATTATAGCGGCTATCCAGACGATGTAGGAAGT
GAAATTGAAGATGATGTGTCTGAGAATCAGCACAAAAGGCCAAGTAAAGGGTGGAAATTT
TTCCCTCGGATTTGTGTGAAGAATTCTTTATGCCTATTAAATCCACTGCCAGGACTGAAA
GTGAAAACACACGTTCCCACACCCTCATCTCAAGCAGTAAAGAGAGTTTCAGGATTGAAA
CCAAAGACGCCCCAGAGTCCCACATCTTATGCTCATGAAGTCAAAAGATTAGCTAGAAAA
GCTTATAGTGGTCCTCTTGAGAAGAATTCTTGTGATACTATAAATAAGCAAAGATTTCAC
TCTGGAGTACTGTCTCGCGAGCTTTACAAAGCTGATAATAGAAGTTTTTCCGGCCAACTA
CCTAACCCTAGTGATTCATGTAAGCTAGTTGGAATCTCTCCTGGAAGACGTTCAAGAAGT
GGGGCTATATCTCCCTATCGAAATGTAGCACCCCCATCTCCATTCAATGAAGGTACAAGG
TTTCTTGGTGTGCCAAAGGAAATGGAGAGTCTTTGGGCTAGTCGCTTTGATTCATTCCGG
AAAGGTTGCTACACTGTCAAGGACAAAGTACCACAGCAGATTGGCACAGGAAGGTTTTCT
GATTCACCAAGTGAAGTAGTTGAGAAAACATTGTACATAGATTCTGTAGATAATGTGCAA
ATTTCAGCCCGTAATTCTGCTTCTTCAAAACCCAAGGGATTAGTGAACTCCTCTAGTAAG
AATATGAAGACACTGGTTAAAAGCAGTGTAGTACTAGAAAATATGGATGCCACGGCTCGT
ACTCAAGGTGCCAAGAACTGGAATGTTTCAGAGAAAGAGAGCAAACAGATTGCTGAAAAG
GAGTCCCTTGATTTGGTGGAAGCTTCTCCCGTTTCCATATCAACTCTCAAAGGCCCTGCT
GATCAGGAGTCTTTGAAACTAAAGCAAAATCTTGATACACTATCTGGAGCCTTAGAGTCT
TCAAAAGTGCATCCCTATGGAAATTTAGGTACAGAAAATGAAGATAACAAAAATGCAAAT
GACCCAAAAGATTCTAACCTTACCTCCGTGGAATCTCCTATACCACCACCCTTGCCTAAA
TCTCCCTCTGAATCTTGGCTTTGGCGCACGTTGCCTTCCATTCCTTTGAGAACCCCATTC
TCAAGTTTGAGCTCCAAGAAGCAGAACAAGAAGTCCCACACTGATGGTACCAAGTGGGAG
ACTATTGTGAAAACTTCTAACTTGCATAAGGATCATGTCCGTTACTCCGAGGAACTATAT
ACTCTTGGTTCTTGTCAGCAGAGCAAAGCTTGA

Peptide Sequence

PEP ID

XP_016481116.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107802180 [Nicotiana tabacum]
Sequence

MEKKQLDFNAPLLSVRKISSSLSPHERANKKIIERAPPNRQQSLPVKKSDWELSEVTKPV
AVPFMWEQIPGRRKGNNDARANLRVECSSSPRLPPGRLPETIRFYSGERPRAQNIYKSPA
EGLPWIDHAALLDSLVESIYTRGDRESEDDAYSDAPETLSPTESLSLDCSVSGLSGHQSS
DSKPSGTFSIDSQTRDFMMSRFLPAAKAVVLETPQYVQKKQVPVSTEQPKPVPVERKPTV
KRMESKPVSYYSGYPDDVGSEIEDDVSENQHKRPSKGWKFFPRICVKNSLCLLNPLPGLK
VKTHVPTPSSQAVKRVSGLKPKTPQSPTSYAHEVKRLARKAYSGPLEKNSCDTINKQRFH
SGVLSRELYKADNRSFSGQLPNPSDSCKLVGISPGRRSRSGAISPYRNVAPPSPFNEGTR
FLGVPKEMESLWASRFDSFRKGCYTVKDKVPQQIGTGRFSDSPSEVVEKTLYIDSVDNVQ
ISARNSASSKPKGLVNSSSKNMKTLVKSSVVLENMDATARTQGAKNWNVSEKESKQIAEK
ESLDLVEASPVSISTLKGPADQESLKLKQNLDTLSGALESSKVHPYGNLGTENEDNKNAN
DPKDSNLTSVESPIPPPLPKSPSESWLWRTLPSIPLRTPFSSLSSKKQNKKSHTDGTKWE
TIVKTSNLHKDHVRYSEELYTLGSCQQSKA

Transcript Sequence

Gene sequence data has not been registered.